STRINGSTRING
GRMZM2G007590_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G007590_P01" - Spliceosomal protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G007590_P01Spliceosomal protein (233 aa)    
Predicted Functional Partners:
IDP2400
Hypothetical protein LOC100273115 (284 aa)
     
  0.990
GRMZM2G178227_P01
Hypothetical protein LOC100217051 (504 aa)
     
  0.988
LOC542179
U1 snRNP (491 aa)
     
  0.984
GRMZM2G301536_P01
Hypothetical protein LOC100383273 (483 aa)
     
  0.983
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
     
  0.981
GRMZM2G416061_P02
Small nuclear ribonucleoprotein Sm D1 (114 aa)
     
  0.980
GRMZM2G027571_P02
Small nuclear ribonucleoprotein Sm D1 (115 aa)
     
  0.980
AY106137
LOC100282926 (478 aa)
     
    0.980
IDP147
Hypothetical protein LOC100193568 (105 aa)
     
  0.980
IDP1453
Hypothetical protein LOC100193106 (105 aa)
     
  0.980
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (13%) [HD]