STRINGSTRING
Zm.94653 protein (Zea mays) - STRING interaction network
"Zm.94653" - LOC100285431 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.94653LOC100285431 (pco090816a), mRNA (499 aa)    
Predicted Functional Partners:
GRMZM2G054361_P01
Hypothetical protein LOC100217270 (485 aa)
       
      0.895
GRMZM2G049888_P01
Hypothetical protein LOC100384848 (536 aa)
       
      0.895
GRMZM2G014458_P01
Protein lava lamp-like (272 aa)
         
  0.656
GRMZM2G473182_P02
Uncharacterized protein (491 aa)
       
      0.573
GRMZM2G087692_P03
Hypothetical protein LOC100276173 (343 aa)
         
  0.548
Zm.84835
Hypothetical protein LOC100276216 (346 aa)
           
  0.546
GRMZM2G375064_P01
Glutamate synthase 2 [NADH], chloroplastic-like (2194 aa)
           
  0.545
Zm.24266
Uncharacterized protein (2187 aa)
           
  0.545
tac910.01
Glutamate synthase 1 [NADH], chloroplastic (2173 aa)
           
  0.545
GLSF
Ferredoxin-dependent glutamate synthase, chloroplastic Precursor (EC 1.4.7.1)(Fd-GOGAT) (1616 aa)
           
  0.507
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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