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GRMZM2G009438_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G009438_P01" - Type III polyketide synthase B in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G009438_P01Type III polyketide synthase B (364 aa)    
Predicted Functional Partners:
100384227
Protein EXPORTIN 1A (913 aa)
     
      0.839
GRMZM2G043238_P01
Protein HASTY 1 (947 aa)
     
      0.839
103625708
annotation not available (1097 aa)
     
      0.839
103630545
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1622 aa)
     
        0.789
100279221
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (813 aa)
   
 
  0.767
103627881
annotation not available (742 aa)
       
 
  0.728
rop2
Rho-related protein from plants2; Putative ROP family GTPase ROP2; Rac-like GTP-binding protein 6; Rho protein from plants2; Rop2 small GTP binding protein; Uncharacterized protein ; Belongs to the small GTPase superfamily. Rho family (197 aa)
       
 
  0.699
542094
Rho-related protein from plants 9; Putative ROP family GTPase ROP9 ; Belongs to the small GTPase superfamily. Rho family (197 aa)
       
 
  0.699
rop1
Rho-related protein from plants 1; Belongs to the small GTPase superfamily. Rho family (451 aa)
       
 
  0.699
rop4
Rho-related protein from plants 4; Rac-like GTP-binding protein 5; Uncharacterized protein ; Belongs to the small GTPase superfamily. Rho family (197 aa)
       
 
  0.699
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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