STRINGSTRING
cl1298_1 protein (Zea mays) - STRING interaction network
"cl1298_1" - LOC542000 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl1298_1LOC542000 (481 aa)    
Predicted Functional Partners:
GRMZM2G158205_P01
Hypothetical protein LOC100216840 (420 aa)
     
        0.786
LOC542195
Bet v I allergen (154 aa)
     
        0.786
GRMZM2G045215_P01
Anther-specific proline-rich protein APG (369 aa)
     
        0.786
GRMZM2G590973_P01
Uncharacterized protein (60 aa)
           
  0.721
Zm.72803
Kinesin light chain (713 aa)
           
  0.721
Zm.79447
Fusca homolog (445 aa)
           
  0.721
csu1171
Hypothetical protein LOC100274365 (274 aa)
           
  0.721
umc1144
Hypothetical protein LOC100194090 (331 aa)
     
        0.719
IDP631
Hypothetical protein LOC100191238 ; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (353 aa)
     
        0.669
ZmGR1b
GR1a protein (133 aa)
     
        0.627
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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