STRINGSTRING
pco072020 protein (Zea mays) - STRING interaction network
"pco072020" - LOC100283331 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco072020LOC100283331 (111 aa)    
Predicted Functional Partners:
rpl2-A
50S ribosomal protein L2, chloroplastic ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
     
  0.999
GRMZM2G436038_P01
Annotation not available (340 aa)
     
  0.999
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
     
  0.999
Zm.124974
UBiQuitin family member (143 aa)
     
  0.999
TIDP2739
LOC100282772 (229 aa)
     
  0.999
RPL10
60S ribosomal protein L10 (QM protein homolog) (220 aa)
     
  0.999
pco145462
Hypothetical protein LOC100192774 (193 aa)
     
  0.999
GRMZM2G108348_P01
40S ribosomal protein S9 (194 aa)
     
  0.999
GRMZM5G863656_P01
Uncharacterized protein (64 aa)
     
  0.999
Zm.136593
Uncharacterized protein (159 aa)
     
  0.999
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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