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Zm.3435 protein (Zea mays) - STRING interaction network
"Zm.3435" - Vacuolar amino acid transporter 1-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.3435Vacuolar amino acid transporter 1-like (399 aa)    
Predicted Functional Partners:
GRMZM2G375064_P01
Glutamate synthase 2 [NADH], chloroplastic-like (2194 aa)
           
  0.532
Zm.24266
Uncharacterized protein (2187 aa)
           
  0.532
tac910.01
Glutamate synthase 1 [NADH], chloroplastic (2173 aa)
           
  0.532
S6K
Ribosomal protein S6 kinase (486 aa)
       
 
  0.475
IDP300
LOC100281573 (481 aa)
       
 
  0.475
GRMZM2G022645_P01
Hypothetical protein LOC100272952 (LOC100272952), mRNA (647 aa)
           
  0.459
ereb149
Hypothetical protein LOC100275603 (422 aa)
           
  0.457
Zm.125688
Uncharacterized LOC103646542 (445 aa)
           
  0.457
GRMZM2G028700_P01
Hypothetical protein LOC100192777 (996 aa)
       
 
  0.445
GRMZM2G009593_P01
Serine/threonine-protein phosphatase (998 aa)
       
 
  0.445
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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