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Zm.24555 protein (Zea mays) - STRING interaction network
"Zm.24555" - Immutans protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.24555Immutans protein (547 aa)    
Predicted Functional Partners:
PDS1
Phytoene dehydrogenase, chloroplastic/chromoplastic Precursor (EC 1.14.99.-)(Phytoene desaturase); This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene (571 aa)
           
  0.531
GRMZM2G157018_P01
ATP synthase D chain, mitochondrial (170 aa)
           
  0.457
ZDS1
Zeta-carotene desaturase, chloroplastic/chromoplastic Precursor (EC 1.14.99.30)(Carotene 7,8-desaturase); Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (572 aa)
           
  0.457
Zm.5805
Filamentation temperature-sensitive H 2A (677 aa)
           
  0.416
FtsH2B
Filamentation temperature-sensitive H 2B (677 aa)
           
  0.416
pgr5
Pgr5 protein (127 aa)
           
  0.410
PGR5
PGR5 (125 aa)
           
  0.410
GRMZM2G473329_P01
Annotation not available (168 aa)
           
  0.400
GRMZM2G357734_P03
Uncharacterized protein (638 aa)
           
  0.400
GRMZM2G088601_P03
Hypothetical protein LOC100303784 (527 aa)
           
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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