STRINGSTRING
Zm.23170 protein (Zea mays) - STRING interaction network
"Zm.23170" - Fimbrin 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.23170Fimbrin 1 (705 aa)    
Predicted Functional Partners:
GRMZM2G353718_P01
Uncharacterized protein (68 aa)
       
 
  0.947
GRMZM2G097426_P01
Hypothetical protein LOC100193381 (165 aa)
       
 
  0.947
Zm.26280
Actin-related protein 2/3 complex subunit 5 ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (136 aa)
       
 
  0.936
GRMZM2G478779_P01
Actin-1 (275 aa)
       
  0.932
GRMZM2G079214_P02
Annotation not available (1142 aa)
     
  0.931
GRMZM2G469900_P01
Annotation not available (700 aa)
     
  0.930
GRMZM2G473891_P01
Uncharacterized protein (612 aa)
     
  0.928
Zm.86777
Hypothetical protein LOC100280387 (LOC100280387), mRNA (138 aa)
       
  0.928
GRMZM5G859691_P01
Annotation not available (657 aa)
       
  0.928
GRMZM5G837595_P01
Uncharacterized protein (463 aa)
       
  0.928
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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