STRINGSTRING
NBP protein (Zea mays) - STRING interaction network
"NBP" - Nucleic acid binding protein1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBPNucleic acid binding protein1 (303 aa)    
Predicted Functional Partners:
pco116928b
LOC100282000 (130 aa)
     
        0.801
GRMZM2G108643_P01
Hypothetical protein LOC100274150 (209 aa)
     
        0.799
RPS17
30S ribosomal protein S17, chloroplastic Precursor ; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (132 aa)
     
        0.793
csu173
Hypothetical protein LOC100273241 (249 aa)
     
        0.741
bsd2
Bundle sheath defective2 (129 aa)
     
        0.735
Zm.429
Sigma factor SIG2A (539 aa)
     
        0.725
GRMZM2G164965_P01
Hypothetical protein LOC100273366 (267 aa)
     
        0.675
GRMZM2G077214_P01
Hypothetical protein LOC100274225 (404 aa)
     
        0.667
GRMZM2G157007_P01
50S ribosomal protein L40 (148 aa)
     
        0.653
Zm.385
Uroporphyrinogen decarboxylase, chloroplastic Precursor (URO-D)(UPD)(EC 4.1.1.37) (394 aa)
     
        0.631
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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