STRINGSTRING
Zm.29813 protein (Zea mays) - STRING interaction network
"Zm.29813" - Protein CASP in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.29813Protein CASP (700 aa)    
Predicted Functional Partners:
Zm.5537
Protein GRIP (230 aa)
       
 
  0.660
GRMZM2G098764_P01
DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide (290 aa)
       
      0.646
Zm.72658
Uncharacterized protein (507 aa)
     
      0.644
GRMZM2G155943_P02
Uncharacterized LOC103629388 (677 aa)
     
      0.616
GRMZM2G056681_P01
Annotation not available (174 aa)
     
      0.616
GRMZM2G172917_P01
Uncharacterized protein (160 aa)
       
 
  0.609
GRMZM5G838961_P01
Golgi SNARE 12 protein ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (243 aa)
       
  0.582
GRMZM5G837058_P01
Golgi SNARE 12 protein ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (218 aa)
       
  0.582
GRMZM2G157026_P01
Golgi SNARE 12 protein ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (243 aa)
       
  0.582
GRMZM2G059106_P01
Golgi SNARE 12 protein ; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (218 aa)
       
  0.582
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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