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STRINGSTRING
gpm560 protein (Zea mays) - STRING interaction network
"gpm560" - Vacuolar cation/proton exchanger 3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm560Vacuolar cation/proton exchanger 3; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (535 aa)    
Predicted Functional Partners:
100193471
annotation not available (566 aa)
       
 
  0.716
100272741
Cation/calcium exchanger 5; Belongs to the Ca(2+)-cation antiporter (CaCA) (TC 2.A.19) family (494 aa)
     
   
  0.706
tdsgR05A09
Monothiol glutaredoxin-S14 chloroplastic (172 aa)
       
 
  0.598
GRMZM2G013695_P01
Monothiol glutaredoxin-S14 chloroplastic; Grx_S14-glutaredoxin subgroup II (172 aa)
       
 
  0.598
AC226221.2_FGP011
annotation not available (204 aa)
       
 
  0.598
cbl10
Calcineurin B-like10 (320 aa)
       
 
  0.540
AY106269
Synaptic glycoprotein SC2 (455 aa)
     
   
  0.511
100193537
Nramp aluminum transporter1 (550 aa)
           
  0.507
103647247
annotation not available (212 aa)
           
  0.499
uaz187
CXIP4 (371 aa)
           
  0.499
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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