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STRINGSTRING
lec1 protein (Zea mays) - STRING interaction network
"lec1" - LEC1 transcription factor1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lec1LEC1 transcription factor1; Leafy cotyledon1 (278 aa)    
Predicted Functional Partners:
ca5p3
CCAAT-HAP5 transcription factor; Nuclear transcription factor Y subunit C-2; Uncharacterized protein (255 aa)
     
 
  0.964
100217109
Nuclear transcription factor Y subunit C-2; Uncharacterized protein (248 aa)
     
 
  0.964
100273685
Nuclear transcription factor Y subunit C-2; Nuclear transcription factor Y subunit C-2 isoform 1; Nuclear transcription factor Y subunit C-2 isoform 2; Nuclear transcription factor Y subunit C-2 isoform 3; Uncharacterized protein (251 aa)
     
 
  0.930
vp1
Regulatory protein viviparous-1; Transcriptional activator specifically required for expression of the maturation program in the seed development. Probably potentiates the response to the seed-specific hormone abscisic acid (ABA). May bind to DNA indirectly (691 aa)
     
   
  0.860
100281601
Nuclear transcription factor Y subunit C-1 (245 aa)
     
 
  0.796
103636228
Putative B3 DNA binding domain family protein (292 aa)
           
  0.779
103644329
annotation not available (367 aa)
     
 
  0.778
uaz7c01g06
Nuclear transcription factor Y subunit A-1; Uncharacterized protein (264 aa)
     
 
  0.778
pco061382
Histone-lysine N-methyltransferase ATX4 (1591 aa)
     
 
  0.731
EREB85
WRI1 transcription factor1 (395 aa)
           
  0.710
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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