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STRINGSTRING
lyce1 protein (Zea mays) - STRING interaction network
"lyce1" - Lycopene epsilon cyclase1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lyce1Lycopene epsilon cyclase1; Uncharacterized protein (755 aa)    
Predicted Functional Partners:
HYD3
Beta-carotene hydroxylase 1 ; Belongs to the sterol desaturase family (319 aa)
           
  0.689
CRTISO1
Carotenoid isomerase 1 (587 aa)
           
  0.689
CCD
9,10-9,10 carotenoid cleavage dioxygenase 1; Uncharacterized protein; White cap1 (550 aa)
           
  0.686
100274964
Plant intracellular Ras-group-related LRR protein 4 (577 aa)
       
 
  0.587
100193462
Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family (1596 aa)
       
 
  0.563
GRMZM2G110739_P01
MLO-like protein (439 aa)
       
 
  0.562
AC196066.3_FGP003
annotation not available (226 aa)
     
   
  0.561
GRMZM2G431708_P02
Ketose-bisphosphate aldolase class-II family protein (837 aa)
           
  0.560
100217246
Exostosin family protein (458 aa)
           
  0.560
GRMZM2G139691_P01
Exostosin family protein (497 aa)
           
  0.560
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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