STRINGSTRING
cc4 protein (Zea mays) - STRING interaction network
"cc4" - Multidomain cystatinPutative uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cc4Multidomain cystatinPutative uncharacterized protein ; (245 aa)    
Predicted Functional Partners:
cc8
Cystatin8 (127 aa)
     
   
  0.701
Zm.85184
Hypothetical protein LOC100277946 (928 aa)
           
  0.547
GRMZM2G153991_P01
FK506-binding protein 2-1 (155 aa)
           
  0.547
cc7
CystatinPutative uncharacterized protein ; (129 aa)
           
  0.534
Zm.86345
Hypothetical protein LOC100304349 (LOC100304349), mRNA (381 aa)
           
  0.511
Zm.92538
LOC100282031 (148 aa)
           
  0.463
GRMZM2G031204_P01
FK506-binding protein 2-1 (155 aa)
           
  0.463
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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