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Zm.10130 protein (Zea mays) - STRING interaction network
"Zm.10130" - Uncharacterized LOC103630932 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.10130Uncharacterized LOC103630932 (249 aa)    
Predicted Functional Partners:
cl15935_1
Hypothetical protein LOC100276755 (256 aa)
     
        0.769
pco062914
Hypothetical protein LOC100191916 (415 aa)
     
        0.762
his2b5
Histone H2B.5 (H2B); Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (154 aa)
     
        0.739
GRMZM2G062555_P01
Plastidic phosphate translocator-like protein1 (357 aa)
     
        0.734
GRMZM2G127168_P01
DNA-binding protein HEXBP (261 aa)
     
        0.678
Zm.5707
Copper chaperone (112 aa)
     
        0.669
Zm.92476
Adhesive/proline-rich protein (86 aa)
     
        0.669
GRMZM2G091258_P01
Hypothetical protein LOC100279750 (282 aa)
     
        0.610
GRMZM2G340359_P01
Hypothetical protein LOC100279773 (857 aa)
     
        0.568
GRMZM5G813092_P02
Hypothetical protein LOC100274268 (528 aa)
           
  0.545
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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