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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
atg8e protein (Zea mays) - STRING interaction network
"atg8e" - Autophagy 8e, mRNA in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg8eAutophagy 8e, mRNA (138 aa)    
Predicted Functional Partners:
Atg7
Autophagy 7; Autophagy-related 7 (1021 aa)
     
 
  0.982
GRMZM2G056645_P01
Protein SPIRRIG (2552 aa)
     
 
  0.980
100275089
Protein NBR1-like protein (842 aa)
     
 
  0.977
nbr1b
annotation not available (834 aa)
       
 
  0.973
Atg4a
Cysteine protease; Autophagy-related 4 variant 1; Cysteine protease ATG4B; Uncharacterized protein (492 aa)
     
 
  0.944
atg5
Autophagy protein 5; Required for autophagy (374 aa)
       
 
  0.931
Atg4b
Cysteine protease; Autophagy 4b variant 3; Uncharacterized protein (492 aa)
     
 
  0.909
atg18e
Uncharacterized protein (371 aa)
     
 
  0.908
100193785
AAA-type ATPase family protein / ankyrin repeat family protein (485 aa)
     
 
  0.900
100275976
Autophagy-related protein 101 (213 aa)
     
 
  0.880
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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