STRINGSTRING
Zm.21536 protein (Zea mays) - STRING interaction network
"Zm.21536" - SURF1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.21536SURF1 (344 aa)    
Predicted Functional Partners:
Zm.160418
Hypothetical protein LOC100274057 (424 aa)
   
 
  0.884
GRMZM2G162776_P01
Hypothetical protein LOC100193223 (445 aa)
   
 
  0.884
GRMZM2G158479_P02
Hypothetical protein LOC100194151 (304 aa)
     
 
  0.881
GRMZM2G032367_P01
Hypothetical protein LOC100384742 (306 aa)
     
 
  0.881
GRMZM2G324991_P03
Uncharacterized protein (503 aa)
   
 
  0.807
GRMZM2G118074_P01
Uncharacterized protein (467 aa)
   
 
  0.807
GRMZM2G007715_P01
Uncharacterized protein (629 aa)
   
 
  0.807
GRMZM5G827505_P02
Hypothetical protein LOC100279289 (508 aa)
     
 
  0.807
GRMZM2G447379_P01
Annotation not available (187 aa)
     
 
  0.807
GRMZM2G376600_P01
Annotation not available (74 aa)
     
 
  0.807
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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