STRINGSTRING
pco108516 protein (Zea mays) - STRING interaction network
"pco108516" - LOC542519 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco108516LOC542519 (112 aa)    
Predicted Functional Partners:
GRMZM2G418263_P01
Uncharacterized protein (1807 aa)
       
  0.969
GRMZM2G349554_P01
Uncharacterized protein (284 aa)
       
  0.969
Zm.149771
Uncharacterized protein (1293 aa)
       
  0.969
GRMZM2G033135_P01
Serine/threonine-protein kinase SMG1-like (1856 aa)
       
  0.969
Zm.159707
Peptidyl-prolyl cis-trans isomerase 1 (124 aa)
     
 
  0.948
Zm.23669
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like (276 aa)
     
 
  0.944
BSD10
Hypothetical protein LOC100193949 (600 aa)
       
      0.910
cl754_1a
Hypothetical protein LOC100279553 (487 aa)
       
 
  0.897
GRMZM2G327680_P01
Uncharacterized protein (380 aa)
       
 
  0.896
GRMZM2G397148_P01
Uncharacterized protein (266 aa)
       
      0.896
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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