STRINGSTRING
gpm930 protein (Zea mays) - STRING interaction network
"gpm930" - LOC100283085 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm930LOC100283085 (136 aa)    
Predicted Functional Partners:
umc1974
Hypothetical protein LOC100383080 (240 aa)
   
 
  0.982
Zm.78120
Photosystem I reaction center subunit XI (212 aa)
   
 
  0.982
Zm.28224
Photosystem I reaction center subunit II (236 aa)
   
 
  0.982
GRMZM2G013342_P01
Hypothetical protein LOC100191984 (199 aa)
   
 
  0.982
GRMZM2G085646_P01
Photosystem I reaction center subunit III, chloroplastic-like (232 aa)
   
 
  0.980
Zm.67341
Photosystem I reaction center subunit III (225 aa)
   
 
  0.980
PSAH
Photosystem I reaction center subunit VI, chloroplastic Precursor (PSI-H)(Light-harvesting complex I 11 kDa protein); Possible role could be the docking of the LHC I antenna complex to the core complex (142 aa)
     
 
  0.968
psaC
Photosystem I iron-sulfur center (Photosystem I subunit VII)(9 kDa polypeptide)(PSI-C)(PsaC); Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair [...] (81 aa)
   
 
 
  0.966
GRMZM2G096792_P01
Uncharacterized protein (81 aa)
   
 
 
  0.965
GRMZM5G852325_P01
Annotation not available (62 aa)
   
 
 
  0.953
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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