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PGR5 protein (Zea mays) - STRING interaction network
PGR5 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGR5PGR5 (125 aa)    
Predicted Functional Partners:
Z477F24.15
Ferredoxin (150 aa)
     
 
  0.592
petB
Cytochrome b6 ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (232 aa)
       
 
  0.572
ndhB1
NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 1.6.5.-)(NAD(P)H dehydrogenase, subunit 2 B)(NADH-plastoquinone oxidoreductase subunit 2 B); NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (510 aa)
           
  0.561
GRMZM5G800101_P01
NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 1.6.5.-)(NAD(P)H dehydrogenase, subunit 2 B)(NADH-plastoquinone oxidoreductase subunit 2 B) (510 aa)
           
  0.561
GRMZM2G081955_P01
Tab2 protein (390 aa)
     
   
  0.539
GRMZM2G071450_P01
Plastocyanin ; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (155 aa)
           
  0.525
GRMZM2G086763_P01
Chloroplast post-illumination chlorophyll fluorescence increase protein (269 aa)
           
  0.525
ZemaCp052
Cytochrome b6 ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (232 aa)
       
 
  0.496
Zm.8898
Serine/threonine-protein kinase SNT7 (562 aa)
     
   
  0.492
petA
Apocytochrome f Precursor ; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (320 aa)
           
  0.486
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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