STRINGSTRING
Zm.28308 protein (Zea mays) - STRING interaction network
"Zm.28308" - LOC100284647 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.28308LOC100284647 (379 aa)    
Predicted Functional Partners:
Zm.7885
Hypothetical protein LOC100383498 (494 aa)
         
  0.902
GRMZM2G135498_P01
3-oxoacyl-synthase I (461 aa)
         
  0.902
pco121523
Hypothetical protein LOC100193451 (505 aa)
         
  0.902
GRMZM2G007757_P01
Hypothetical protein LOC100274137 (462 aa)
         
  0.902
GRMZM2G125052_P01
Uncharacterized protein (260 aa)
     
 
  0.901
GRMZM2G079256_P01
Hypothetical protein LOC100192829 (301 aa)
     
 
  0.901
Zm.82601
Acyl-desaturase (409 aa)
         
    0.900
gpm375a
Hypothetical protein LOC100191672 (396 aa)
         
    0.900
GRMZM5G812228_P03
ACS-like protein (649 aa)
         
    0.900
GRMZM2G430616_P01
Annotation not available (113 aa)
         
    0.900
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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