STRINGSTRING
srs3 protein (Zea mays) - STRING interaction network
"srs3" - SHI in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srs3SHI (296 aa)    
Predicted Functional Partners:
GRMZM2G363429_P01
Putative uncharacterized protein (550 aa)
           
  0.710
WRKY42
Hypothetical protein LOC100279449 (414 aa)
           
  0.429
WRKY103
Probable WRKY transcription factor 65 (306 aa)
           
  0.429
WRKY111
Putative uncharacterized protein (277 aa)
           
  0.429
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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