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STRINGSTRING
pco066784 protein (Zea mays) - STRING interaction network
"pco066784" - Protein kinase family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco066784Protein kinase family protein (599 aa)    
Predicted Functional Partners:
103643870
annotation not available (785 aa)
     
 
  0.631
pco135758
Protein EARLY FLOWERING 3 (756 aa)
       
 
  0.606
103630791
Protein EARLY FLOWERING 3 (647 aa)
       
 
  0.606
100501876
Clathrin interactor EPSIN 1 (598 aa)
     
   
  0.595
100192562
Protein SAWADEE HOMEODOMAIN HOMOLOG 1; Retrotransposon protein; Uncharacterized protein (269 aa)
           
  0.589
GRMZM2G014323_P01
annotation not available (1201 aa)
     
 
  0.567
GRMZM2G439819_P01
annotation not available (1150 aa)
     
 
  0.546
GRMZM5G864735_P01
Histone H3.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (136 aa)
       
 
  0.513
GRMZM2G475899_P01
Histone H3.2 (245 aa)
       
 
  0.513
GRMZM2G451254_P01
Histone H3 (136 aa)
       
 
  0.513
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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