STRINGSTRING
umc2111 protein (Zea mays) - STRING interaction network
"umc2111" - LOC100282844 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc2111LOC100282844 (207 aa)    
Predicted Functional Partners:
GRMZM2G178486_P01
Zinc finger, C3HC4 type family protein (115 aa)
     
        0.794
cl50078_1
Hypothetical protein LOC100191661 (369 aa)
     
        0.787
GRMZM2G165506_P02
Pollen-specific protein C13 (172 aa)
     
        0.786
GRMZM2G097739_P01
Cysteine-type endopeptidase/ ubiquitin thiolesterase (495 aa)
     
        0.781
Zm.77075
Esterase (397 aa)
     
        0.772
gpm417
Hypothetical protein LOC100216623 (278 aa)
     
        0.772
GRMZM2G037413_P03
Cellulose synthase 11 (1007 aa)
     
        0.767
Bk2L3
Brittle stalk-2-like protein 3 (448 aa)
     
        0.762
pco145505
Hypothetical protein LOC100192072 (249 aa)
     
        0.753
GRMZM2G147422_P01
Hypothetical protein LOC100279256 (526 aa)
     
        0.746
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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