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STRINGSTRING
542039 protein (Zea mays) - STRING interaction network
"542039" - Agamous-like MADS-box protein AGL11 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
542039Agamous-like MADS-box protein AGL11 (268 aa)    
Predicted Functional Partners:
GRMZM2G420121_P01
annotation not available (561 aa)
       
 
  0.528
GRMZM2G412150_P01
annotation not available (1369 aa)
       
 
  0.528
103636228
Putative B3 DNA binding domain family protein (292 aa)
           
  0.517
100194333
Histone deacetylase complex subunit SAP18; Uncharacterized protein (152 aa)
       
 
  0.514
100381502
Histone deacetylase complex subunit SAP18; Uncharacterized protein (175 aa)
       
 
  0.514
GRMZM2G156162_P06
Choline monooxygenase chloroplastic (409 aa)
           
  0.505
100283066
Sorbitol dehydrogenase (366 aa)
           
  0.487
endo1
Endosperm specific protein; Uncharacterized protein (472 aa)
     
        0.480
103651217
annotation not available (383 aa)
           
  0.465
100191513
2-oxoisovalerate dehydrogenase subunit alpha 2 mitochondrial (488 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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