STRINGSTRING
umc2196 protein (Zea mays) - STRING interaction network
"umc2196" - LOC100282018 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc2196LOC100282018 (149 aa)    
Predicted Functional Partners:
GRMZM2G511910_P01
Annotation not available (121 aa)
     
  0.744
cl33987_1
LOC100281124 (207 aa)
     
  0.744
GRMZM2G412806_P01
Annotation not available (134 aa)
     
  0.744
pco081417
Hypothetical protein LOC100191273 (268 aa)
     
  0.744
GRMZM2G136058_P01
Hypothetical protein LOC100273431 (211 aa)
     
  0.744
Zm.25455
LOC100285181 (210 aa)
     
  0.744
Zm.128897
Transmembrane emp24 domain-containing protein 10 (LOC100285358), mRNA (222 aa)
     
  0.744
GRMZM2G021129_P01
Transmembrane emp24 domain-containing protein 10 (229 aa)
     
  0.744
GRMZM2G041642_P02
Sec12-like protein 2 (334 aa)
         
  0.692
GRMZM2G181536_P01
Uncharacterized protein (194 aa)
       
  0.625
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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