STRINGSTRING
EREB180 protein (Zea mays) - STRING interaction network
"EREB180" - Hypothetical protein LOC100192457 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EREB180Hypothetical protein LOC100192457 (340 aa)    
Predicted Functional Partners:
Zm.9043
Gamma-glutamylcysteine synthetase1 (503 aa)
           
  0.558
hda101
Probable histone deacetylase 19 (EC 3.5.1.98)(RPD3 homolog); Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes (By similarity) (517 aa)
       
 
  0.496
Zm.84742
Kinesin heavy chain Fragment (950 aa)
           
  0.470
umc2780
Hypothetical protein LOC100193713 (770 aa)
           
  0.438
GRMZM5G861659_P02
Putative uncharacterized protein (418 aa)
           
  0.438
GRMZM2G482154_P01
Annotation not available (633 aa)
           
  0.438
GRMZM2G427672_P01
Putative uncharacterized protein (647 aa)
           
  0.438
GRMZM2G417223_P01
Nucleic acid binding protein (637 aa)
           
  0.438
Zm.160416
Uncharacterized LOC100383161 (426 aa)
           
  0.438
GRMZM2G180909_P01
Nucleic acid binding protein (448 aa)
           
  0.438
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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