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pco089076 protein (Zea mays) - STRING interaction network
"pco089076" - Hypothetical protein LOC100216826 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco089076Hypothetical protein LOC100216826 (328 aa)    
Predicted Functional Partners:
GRMZM2G123262_P01
Transcription initiation factor TFIID subunit 5 (447 aa)
   
          0.524
Zm.130339
Nucleotide binding protein (459 aa)
   
          0.524
Zm.35796
Nucleotide binding protein (LOC100285051), mRNA (452 aa)
   
          0.523
GRMZM2G152370_P01
Putative uncharacterized protein (243 aa)
   
          0.517
Zm.20522
Uncharacterized protein (436 aa)
   
          0.516
GRMZM2G168574_P01
Annotation not available (162 aa)
   
          0.511
GRMZM2G368126_P01
Uncharacterized protein (472 aa)
   
          0.507
Zm.26437
THO complex subunit 6 (368 aa)
   
          0.497
AC205703.4_FGP004
Annotation not available (184 aa)
   
          0.495
GRMZM2G327655_P01
Hypothetical protein LOC100193458 (333 aa)
   
          0.450
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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