STRINGSTRING
Zm.11802 protein (Zea mays) - STRING interaction network
"Zm.11802" - NEDD8-specific protease 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.11802NEDD8-specific protease 1 (253 aa)    
Predicted Functional Partners:
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
       
  0.845
Zm.124974
UBiQuitin family member (143 aa)
       
  0.845
GRMZM5G877815_P01
40S ribosomal protein S27a (156 aa)
       
  0.773
UBF9
Ubiquitin-40S ribosomal protein S27a Precursor [Contains Ubiquitin;40S ribosomal protein S27a]; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue [...] (155 aa)
       
  0.773
GRMZM2G428670_P01
Ubiquitin family protein (LOC100284492), mRNA (268 aa)
       
  0.773
MubC5
Polyubiquitin (535 aa)
       
  0.773
GRMZM2G409726_P01
Polyubiquitin (533 aa)
       
  0.773
GRMZM2G386560_P01
Annotation not available (64 aa)
       
  0.773
Zm.86935
40S ribosomal protein S27a (155 aa)
       
  0.773
GRMZM2G355959_P01
Uncharacterized protein (130 aa)
       
  0.773
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]