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GRMZM2G019746_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G019746_P01" - 4-coumarate--CoA ligase-like 5 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G019746_P014-coumarate--CoA ligase-like 5 (560 aa)    
Predicted Functional Partners:
GRMZM2G136857_P01
Jasmonate O-methyltransferase (390 aa)
           
  0.730
100273465
Salicylate/benzoate carboxyl methyltransferase; Jasmonate O-methyltransferase; Uncharacterized protein (382 aa)
           
  0.730
RIP
rRNA N-glycosidase (337 aa)
           
  0.566
100281617
Propionyl-CoA carboxylase beta chain; Uncharacterized protein (619 aa)
 
   
  0.476
GRMZM5G820287_P02
annotation not available (670 aa)
 
   
  0.419
GRMZM2G339336_P01
Long chain acyl-CoA synthetase 8 (381 aa)
 
   
  0.404
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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