STRINGSTRING
GRMZM2G021464_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G021464_P01" - Small nuclear ribonucleoprotein LSM1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G021464_P01Small nuclear ribonucleoprotein LSM1 (128 aa)    
Predicted Functional Partners:
AC155610.2_FGP009
Uncharacterized protein (67 aa)
     
  0.991
GRMZM2G159675_P01
Hypothetical protein LOC100192719 (177 aa)
     
  0.989
GRMZM2G049013_P02
SAD1 (137 aa)
     
  0.989
GRMZM2G386811_P01
Uncharacterized protein (67 aa)
     
  0.989
GRMZM2G106105_P01
LSM7-like (98 aa)
     
  0.989
GRMZM2G016097_P01
LSM7-like (156 aa)
     
  0.989
GRMZM2G014300_P01
SAD1 (88 aa)
     
  0.988
Zm.79355
SnRNP core Sm protein Sm-X5-like protein (93 aa)
     
  0.988
GRMZM2G063322_P01
snRNP core Sm protein Sm-X5-like protein (93 aa)
     
  0.988
GRMZM2G095114_P01
Hypothetical protein LOC100384520 (146 aa)
     
  0.988
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (11%) [HD]