STRINGSTRING
Zm.17818 protein (Zea mays) - STRING interaction network
"Zm.17818" - Nicalin in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.17818Nicalin (550 aa)    
Predicted Functional Partners:
Zm.158131
Plastoquinol-plastocyanin reductase (117 aa)
     
        0.716
umc2361
Hypothetical protein LOC100279928 (691 aa)
     
 
  0.709
GRMZM2G133173_P01
Hypothetical protein LOC100273881 (711 aa)
     
 
  0.709
Zm.47553
glutamyl-tRNA synthetase, cytoplasmic (715 aa)
     
      0.678
GRMZM2G046932_P01
Hypothetical protein LOC100383320 (715 aa)
     
      0.678
Zm.5463
prolyl-tRNA synthetase (560 aa)
     
      0.674
GRMZM2G094123_P01
Hypothetical protein LOC100272402 (508 aa)
     
      0.674
AC202120.3_FGP003
Annotation not available (125 aa)
     
      0.674
FDX1
Ferredoxin-1, chloroplastic Precursor (Ferredoxin I)(Fd I); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Occupies a key position both for transferring the photoreducing power to Fd- NADP(+) oxidoreductase (FNR), hence the formation of NADPH, and for mediating the cyclic electron flow around photosystem I (PSI) (150 aa)
     
        0.611
GRMZM2G014788_P01
Hypothetical protein LOC100384763 (1193 aa)
     
 
  0.580
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (6%) [HD]