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STRINGSTRING
cl24641_1 protein (Zea mays) - STRING interaction network
"cl24641_1" - Transducin/WD40 repeat-like superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl24641_1Transducin/WD40 repeat-like superfamily protein (336 aa)    
Predicted Functional Partners:
100273452
Ssu72-like family protein; Protein SSU72; Uncharacterized protein (198 aa)
     
  0.983
IDP798
Cleavage and polyadenylation specificity factor subunit 2 (766 aa)
     
  0.957
100381986
Flowering time control protein FY (718 aa)
     
  0.951
GRMZM2G126197_P01
annotation not available (246 aa)
     
  0.941
GRMZM2G049027_P01
30-kDa cleavage and polyadenylation specificity factor 30 (251 aa)
     
  0.941
gpm667
Retinoblastoma-binding protein-like (589 aa)
     
 
  0.927
GRMZM5G899390_P01
Serine/threonine-protein phosphatase (322 aa)
     
  0.921
pco089222
Serine/threonine-protein phosphatase (406 aa)
     
  0.921
pco094064
Serine/threonine-protein phosphatase (317 aa)
     
  0.921
103634267
Serine/threonine-protein phosphatase (322 aa)
     
  0.921
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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