STRINGSTRING
mbd106 protein (Zea mays) - STRING interaction network
"mbd106" - Methyl binding domain in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbd106Methyl binding domain (428 aa)    
Predicted Functional Partners:
MBD117
LOC100170247 (1176 aa)
           
  0.725
mbd108
Hypothetical protein LOC542070 (297 aa)
           
  0.721
mbd110
Hypothetical protein LOC100384343 (93 aa)
           
  0.721
Zm.27122
Uncharacterized protein (1812 aa)
           
  0.545
Zm.651
Methyl binding domain (302 aa)
           
  0.528
ADF2
Actin-depolymerizing factor 2 (ADF-2)(ZmADF2)(ZmABP2); Actin-depolymerizing protein. Severs actin filaments (F- actin) and binds to actin monomers (By similarity) (139 aa)
           
  0.405
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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