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STRINGSTRING
mbd106 protein (Zea mays) - STRING interaction network
"mbd106" - Putative methyl-binding domain protein MBD106 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbd106Putative methyl-binding domain protein MBD106; Uncharacterized protein (428 aa)    
Predicted Functional Partners:
100381661
Putative NOT transcription complex subunit VIP2 (616 aa)
           
  0.808
107305678
annotation not available (384 aa)
           
  0.698
hda108
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (458 aa)
           
  0.650
GRMZM2G347270_P01
annotation not available (467 aa)
           
  0.555
100281429
Putative NOT transcription complex subunit VIP2 (624 aa)
           
  0.555
GRMZM5G843991_P01
Methyl-CpG-binding domain-containing protein 8 (164 aa)
           
  0.508
GRMZM5G812738_P01
Methyl-CpG-binding domain-containing protein 8 (182 aa)
           
  0.508
mbd119
annotation not available (934 aa)
           
  0.508
cl34363_1
Methylcytosine binding domain protein (1176 aa)
           
  0.508
GRMZM2G558324_P01
ORMDL family protein (347 aa)
           
  0.487
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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