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TIDP3004 protein (Zea mays) - STRING interaction network
"TIDP3004" - P-loop containing nucleoside triphosphate hydrolase superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIDP3004P-loop containing nucleoside triphosphate hydrolase superfamily protein; GTP-binding protein; Uncharacterized protein (354 aa)    
Predicted Functional Partners:
cl24029_1
Elongation factor P (235 aa)
   
        0.857
103636114
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins (264 aa)
   
   
  0.828
ij1
Protein Iojap, chloroplastic; May be a ribosome silencing factor (Potential). Involved in plastid biogenesis. Plastids affected by a mutation in Iojap lose the ability to perform translation and lack plastid ribosomes; Belongs to the Iojap/RsfS family (228 aa)
   
 
  0.768
GRMZM5G886177_P01
Pathogen-related protein (256 aa)
   
     
  0.725
ERA1
GTPase ERA1, chloroplastic; Nuclear genome-encoded probable GTPase involved in ribosome biogenesis in chloroplasts. Plays a role in 16S rRNA maturation in plastids and may contribute to the assembly of the small (30S) ribosomal subunit (416 aa)
 
   
  0.672
103651495
annotation not available (293 aa)
     
        0.664
gpm35
PsbP domain-containing protein 5 chloroplastic (303 aa)
     
        0.664
csu434
Protein Iojap-related mitochondrial (160 aa)
 
 
  0.660
100282980
Plastid-specific 30S ribosomal protein 2 (251 aa)
     
        0.654
100217180
Amino acid kinase family protein (345 aa)
   
   
  0.627
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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