STRINGSTRING
stm1 protein (Zea mays) - STRING interaction network
"stm1" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stm1Uncharacterized protein (359 aa)    
Predicted Functional Partners:
GRMZM2G466519_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (209 aa)
   
 
  0.763
KN-1
Homeotic protein knotted-1 ; Possible transcription factor that regulates genes involved in development. Mutations in KN-1 alter leaf development. Foci of cells along the lateral vein do not differentiate properly but continue to divide, forming knots. May participate in the switch from indeterminate to determinate cell fates. Probably binds to the DNA sequence 5’-TGAC-3’ (359 aa)
           
  0.721
KNOX1
Homeobox protein knotted-1-like 1 Fragment (310 aa)
           
  0.710
Zm.74300
Prohibitin4 (289 aa)
     
 
  0.663
cox2
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide II); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (457 aa)
       
 
  0.632
GRMZM2G173833_P01
Cytochrome c oxidase subunit 2 Fragment (510 aa)
       
 
  0.632
GRMZM2G142109_P04
Cytochrome oxidase subunit II Fragment ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (437 aa)
       
 
  0.632
GRMZM2G109332_P01
Cytochrome c oxidase subunit 2 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide II) (457 aa)
       
 
  0.632
AC225309.2_FGP003
Uncharacterized protein (380 aa)
       
 
  0.632
hb20
Uncharacterized LOC100284833 (191 aa)
           
  0.626
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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