STRINGSTRING
IDP343 protein (Zea mays) - STRING interaction network
"IDP343" - LOC100284677 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IDP343LOC100284677 (233 aa)    
Predicted Functional Partners:
GRMZM2G147579_P01
Hypothetical protein LOC100304271 (478 aa)
     
  0.990
Zm.131797
Hypothetical protein LOC100275829 (350 aa)
     
  0.990
Zm.5949
VPS28-like protein (213 aa)
     
  0.989
Zm.37718
Uncharacterized protein (213 aa)
     
  0.989
Zm.3050
Ras-related protein Rab-18 (215 aa)
       
      0.897
GRMZM2G145866_P01
Annotation not available (59 aa)
       
      0.897
GRMZM2G075051_P01
Hypothetical protein LOC100272640 (215 aa)
       
      0.897
AC149818.2_FGP001
Ras-related protein Rab-18 (309 aa)
       
      0.897
GRMZM2G165195_P01
Hypothetical protein LOC100216894 (229 aa)
     
  0.757
Zm.6583
Hypothetical protein LOC100273289 (240 aa)
     
  0.757
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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