STRINGSTRING
d9 protein (Zea mays) - STRING interaction network
"d9" - Dwarf plant9 Fragment in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
d9Dwarf plant9 Fragment (625 aa)    
Predicted Functional Partners:
Zm.141614
Putative GID1-like gibberellin receptor (351 aa)
       
 
  0.940
AUX34
Hypothetical protein LOC100193994 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (486 aa)
           
  0.710
Zm.87072
Putative uncharacterized protein ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (812 aa)
           
  0.710
ARF34
Auxin response factor 25-like; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (897 aa)
       
 
  0.635
Zm.124969
F-box protein GID2 (236 aa)
       
 
  0.624
GRMZM2G095397_P01
Uncharacterized protein (345 aa)
       
 
  0.624
phyA1
Hypothetical protein LOC100384268 (LOC100384268), mRNA; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1131 aa)
       
 
  0.610
EREB171
Hypothetical protein LOC100279334 (412 aa)
           
  0.570
Zm.147423
Hypothetical protein LOC100278764 (LOC100278764), mRNA (236 aa)
       
      0.567
bzr10
BES1/BZR1 protein (317 aa)
       
      0.567
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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