STRINGSTRING
pco138410b protein (Zea mays) - STRING interaction network
"pco138410b" - Hypothetical protein LOC100192702 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco138410bHypothetical protein LOC100192702 (164 aa)    
Predicted Functional Partners:
pco076382
Hypothetical protein LOC100272286 (307 aa)
       
      0.648
Zm.3800
LOC100273758 (pco099025), mRNA (273 aa)
       
      0.648
GRMZM2G061485_P01
OB-fold nucleic acid binding domain containing protein (336 aa)
       
      0.648
GRMZM2G018946_P04
OB-fold nucleic acid binding domain containing protein (337 aa)
       
      0.648
Zm.95716
Hypothetical protein LOC100280002 (LOC100280002), mRNA (438 aa)
           
  0.489
Zm.95908
Pectate lyase (451 aa)
           
  0.489
Zm.1359
Putative uncharacterized protein (444 aa)
           
  0.489
GRMZM2G126077_P01
Pectate lyase (368 aa)
           
  0.465
GRMZM2G447989_P01
Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like (658 aa)
           
  0.432
GRMZM2G353659_P01
Putative leucine-rich repeat protein kinase family protein (658 aa)
           
  0.432
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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