STRINGSTRING
IPT8 protein (Zea mays) - STRING interaction network
"IPT8" - Isopentenyl transferase IPT8 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IPT8Isopentenyl transferase IPT8 (388 aa)    
Predicted Functional Partners:
GRMZM2G136892_P01
Annotation not available (451 aa)
   
   
  0.724
GRMZM2G112499_P01
Annotation not available (442 aa)
   
   
  0.724
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
         
  0.721
Zm.158898
Hypothetical protein LOC100275473 (378 aa)
   
   
  0.703
GRMZM2G101460_P02
Hypothetical protein LOC100279198 (588 aa)
   
   
  0.669
GRMZM2G027021_P01
GTP-binding protein hflX (552 aa)
   
   
  0.669
pco122658
Hypothetical protein LOC100191823 (626 aa)
   
   
  0.660
GRMZM2G159506_P01
Annotation not available (77 aa)
   
   
  0.659
GRMZM2G144572_P01
Annotation not available (80 aa)
   
   
  0.659
GRMZM2G027816_P01
Annotation not available (63 aa)
   
   
  0.659
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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