• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G025860_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G025860_P01" - ABC transporter B family member 15 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G025860_P01ABC transporter B family member 15 (1231 aa)    
Predicted Functional Partners:
GRMZM2G467187_P01
E3 ubiquitin-protein ligase ATL6 (377 aa)
           
  0.801
103629913
Putative RING zinc finger domain superfamily protein (421 aa)
           
  0.801
103636054
annotation not available (250 aa)
           
  0.801
103651391
annotation not available (442 aa)
     
   
  0.800
103654612
Amino acid permease 2 (472 aa)
           
  0.798
100193857
Transmembrane amino acid transporter family protein (464 aa)
           
  0.798
103646334
annotation not available (1072 aa)
     
 
  0.727
100382682
annotation not available (1054 aa)
       
 
  0.715
AC203173.3_FGP002
Protein kinase family protein with leucine-rich repeat domain; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (791 aa)
       
 
  0.715
542225
Calcium dependent protein kinase13 (608 aa)
           
  0.715
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (14%) [HD]