STRINGSTRING
cf1 protein (Zea mays) - STRING interaction network
"cf1" - Hypothetical protein LOC100191140 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cf1Hypothetical protein LOC100191140 (394 aa)    
Predicted Functional Partners:
Zm.26429
Hypothetical protein LOC100192907 (159 aa)
     
 
  0.946
Zm.385
Uroporphyrinogen decarboxylase, chloroplastic Precursor (URO-D)(UPD)(EC 4.1.1.37) (394 aa)
 
 
  0.902
GRMZM2G377609_P03
Hypothetical protein LOC100383208 (402 aa)
 
 
  0.886
GRMZM2G024738_P04
Hypothetical protein LOC100192850 (400 aa)
 
 
  0.886
GRMZM2G365644_P02
Uroporphyrinogen decarboxylase 1, chloroplastic-like (392 aa)
 
 
  0.882
GRMZM2G025031_P01
Uroporphyrinogen decarboxylase 1, chloroplastic (204 aa)
 
 
  0.882
sum1
Siroheme uroporphyrinogen methyltransferase1 (423 aa)
 
   
  0.868
Zm.19950
Hypothetical protein LOC100217089 (389 aa)
 
   
  0.868
GRMZM2G116258_P01
Hypothetical protein LOC100193482 (474 aa)
 
   
  0.860
GRMZM2G147955_P01
Hypothetical protein LOC100278507 (297 aa)
   
  0.858
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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