STRINGSTRING
Zm.43636 protein (Zea mays) - STRING interaction network
"Zm.43636" - Microtubule-associated protein SPIRAL2-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.43636Microtubule-associated protein SPIRAL2-like (921 aa)    
Predicted Functional Partners:
Zm.26107
Importin subunit beta-1-like (870 aa)
           
  0.546
pco100840
LOC100285468 (872 aa)
           
  0.454
GRMZM2G066650_P01
Hypothetical protein LOC100381984 (872 aa)
           
  0.454
Zm.22611
Importin subunit beta-1-like (870 aa)
           
  0.454
GRMZM2G001131_P01
Uncharacterized protein (486 aa)
           
  0.454
AC207546.3_FGP004
Uncharacterized protein (510 aa)
           
  0.454
bZIP61
LOC100286123 (170 aa)
           
  0.422
GRMZM2G108085_P02
Hypothetical protein LOC100192737 (246 aa)
           
  0.422
GRMZM2G168959_P02
Hypothetical protein LOC100273034 ; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (508 aa)
           
  0.416
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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