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Zm.5459 protein (Zea mays) - STRING interaction network
"Zm.5459" - Hypothetical protein LOC100216977 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5459Hypothetical protein LOC100216977 (252 aa)    
Predicted Functional Partners:
GRMZM5G822563_P01
Vacuolar protein sorting protein 25 (177 aa)
     
  0.999
GRMZM2G481990_P01
Annotation not available (338 aa)
     
  0.987
GRMZM2G388834_P02
Putative peptidase C48 domain family protein (1344 aa)
     
  0.987
Zm.148474
Hypothetical protein LOC100191871 (446 aa)
     
  0.987
GRMZM2G117022_P01
Uncharacterized protein (443 aa)
     
  0.987
GRMZM2G051339_P01
Uncharacterized protein (838 aa)
     
  0.987
GRMZM2G122983_P01
Hypothetical protein LOC100216677 (229 aa)
     
  0.983
CL11475_1
Hypothetical protein LOC100272755 (285 aa)
     
  0.983
Zm.5949
VPS28-like protein (213 aa)
     
  0.977
Zm.37718
Uncharacterized protein (213 aa)
     
  0.977
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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