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tdsgR56C06 protein (Zea mays) - STRING interaction network
"tdsgR56C06" - Metal-nicotianamine transporter YSL2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdsgR56C06Metal-nicotianamine transporter YSL2 (727 aa)    
Predicted Functional Partners:
FER1
Ferritin-1, chloroplastic; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation; Belongs to the ferritin family (342 aa)
           
  0.720
ZmNAS3
Nicotianamine synthase 3 (359 aa)
           
  0.701
100285295
Nicotianamine synthase 3 (356 aa)
           
  0.701
nas5
Nicotianamine synthase 3 (422 aa)
           
  0.701
sbp11
Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (850 aa)
           
  0.696
tdsgR85C05
annotation not available (993 aa)
     
   
  0.684
100285726
Oligopeptide transporter 4; Uncharacterized protein (760 aa)
           
  0.626
GRMZM2G055279_P01
Copper transporter 1 (176 aa)
           
  0.598
GRMZM2G366919_P01
annotation not available (536 aa)
           
  0.564
pco110312
Metal transporter Nramp3; Uncharacterized protein (516 aa)
           
  0.551
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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