STRINGSTRING
Zm.224 protein (Zea mays) - STRING interaction network
"Zm.224" - Outer cell layer1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.224Outer cell layer1 (803 aa)    
Predicted Functional Partners:
umc1342
Rhodopsin (150 aa)
           
  0.721
Zm.19199
MYB94 (341 aa)
           
  0.721
GRMZM2G027378_P01
Putative uncharacterized proteinUbiquitin-conjugating enzyme spm2 ; (148 aa)
           
  0.721
Zm.102810
MYB94 (315 aa)
           
  0.568
GRMZM2G168807_P01
Major ampullate spidroin 2-2 (LOC100283602), mRNA (341 aa)
       
 
  0.534
EREB55
Putative uncharacterized protein (393 aa)
           
  0.469
GRMZM2G125441_P01
Meiosis 5 (196 aa)
           
  0.463
DEK1
Defective kernel1 ; Essential protein involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active (2159 aa)
           
  0.459
cl63430_1
Hypothetical protein LOC100194029 (298 aa)
           
  0.459
GRMZM2G148867_P02
Hypothetical protein LOC100279824 (384 aa)
           
  0.430
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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