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Zm.91103 protein (Zea mays) - STRING interaction network
"Zm.91103" - U5 small nuclear ribonucleoprotein 200 kDa helicase-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.91103U5 small nuclear ribonucleoprotein 200 kDa helicase-like (2203 aa)    
Predicted Functional Partners:
Zm.10045
Uncharacterized protein (1472 aa)
     
  0.991
GRMZM2G494600_P01
Uncharacterized protein (487 aa)
     
  0.983
Zm.35941
Uncharacterized protein (769 aa)
     
  0.981
GRMZM2G121776_P01
Hypothetical protein LOC100383864 (639 aa)
     
  0.979
GRMZM2G478709_P01
pre-mRNA-splicing factor prp45 (LOC100286002), mRNA (609 aa)
     
  0.979
AY106137
LOC100282926 (478 aa)
     
  0.979
GRMZM2G102898_P01
pre-mRNA-splicing factor CWC22 homolog (265 aa)
     
  0.979
Zm.81049
pre-mRNA-processing-splicing factor 8-like (2366 aa)
     
  0.978
GRMZM2G365443_P01
Annotation not available (218 aa)
     
  0.978
GRMZM2G175804_P01
Photosystem II reaction center Psb28 protein (155 aa)
     
  0.978
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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