• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G027298_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G027298_P01" - Zinc finger CCCH domain-containing protein 30 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G027298_P01Zinc finger CCCH domain-containing protein 30; Nucleic acid binding protein; Uncharacterized protein (594 aa)    
Predicted Functional Partners:
GRMZM5G859220_P01
Uncharacterized protein (173 aa)
     
      0.549
GRMZM2G460090_P01
Regulatory-associated protein of TOR 1 (856 aa)
     
      0.549
100284085
BcpLH protein (1158 aa)
     
      0.549
103640651
Regulatory-associated protein of TOR 1 (1355 aa)
     
      0.549
AC207533.2_FGP002
annotation not available (120 aa)
     
      0.549
GRMZM2G138103_P01
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage (182 aa)
       
      0.533
GRMZM2G172523_P01
Tubulin-tyrosine ligase (535 aa)
       
      0.530
GRMZM2G040364_P01
Putative HLH DNA-binding domain superfamily protein (114 aa)
           
  0.487
nactf125
Uncharacterized protein; Putative NAC domain transcription factor superfamily protein; Uncharacterized protein (359 aa)
     
   
  0.444
103647388
annotation not available (254 aa)
       
 
  0.402
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]