STRINGSTRING
Zm.4019 protein (Zea mays) - STRING interaction network
"Zm.4019" - LOC100280719 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.4019LOC100280719 (731 aa)    
Predicted Functional Partners:
GRMZM2G080828_P01
Hypothetical protein LOC100191445 (472 aa)
   
  0.988
GRMZM2G052457_P01
Uncharacterized protein (434 aa)
   
  0.987
GRMZM2G427097_P01
Hypothetical protein LOC100193614 (411 aa)
         
  0.957
GDH1
Glutamate dehydrogenase (GDH)(EC 1.4.1.3) (411 aa)
         
  0.957
GRMZM2G015289_P02
Putative uncharacterized protein (648 aa)
         
  0.957
GRMZM2G430606_P01
Cyclin-dependent kinases regulatory subunit ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (141 aa)
     
      0.956
Zm.8492
LOC100282062 ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (156 aa)
     
      0.956
AC149818.2_FGP004
Cyclin-dependent kinases regulatory subunit ; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (87 aa)
     
      0.956
Zm.17096
Pale aleurone color1 (87 aa)
       
      0.945
ACC1
Acetyl-coenzyme A carboxylase (2325 aa)
     
  0.920
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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