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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
dbb11 protein (Zea mays) - STRING interaction network
"dbb11" - Profilin homolog5 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dbb11Profilin homolog5 (435 aa)    
Predicted Functional Partners:
mybr69
Putative MYB DNA-binding domain superfamily protein (277 aa)
     
   
  0.701
103633192
annotation not available (855 aa)
           
  0.701
bZIP117
BZIP transcription factor (288 aa)
           
  0.701
pco092156a
Duplicated homeodomain-like superfamily protein (297 aa)
           
  0.654
bzip88
Putative bZIP transcription factor superfamily protein; Uncharacterized protein (215 aa)
     
 
  0.635
103634871
Putative bZIP transcription factor superfamily protein (193 aa)
     
 
  0.635
gpm254
Transcription factor HY5; Uncharacterized protein (170 aa)
     
 
  0.635
bzip6
Uncharacterized protein (196 aa)
     
 
  0.635
100279342
E3 ubiquitin-protein ligase COP1 (655 aa)
       
 
  0.633
GRMZM2G104920_P03
Ubiquitin ligase protein COP1 (693 aa)
       
 
  0.633
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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